Replaced Media PermaLink?

Hello,

I have been using your plugin successfully but noticed that when I replace older files, they are put in the same directory as the older file instead of one with an updated folder structure. For example, if I uploaded something today to the Media Library it would go into mysite\wp-content\uploads\2020\05\filename. If I use Media Replace and select “Replace File, use New FileName and Update all the links” it still goes into the older structure \mysite\wp-content\uploads\2016\02\newfilename. Is there a way to have it go into the newer folder structure instead so it would look like this example? \mysite\wp-content\uploads\2020\05\newfilename.

Thanks!